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The Open Protein Structure Annotation Network
PDB Keyword
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1l6r

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary

    Title Structure- and function-based characterization of a new phosphoglycolate phosphatase from Thermoplasma acidophilum. J.Biol.Chem. 279 517-526 2004
    Site MCSG
    PDB Id 1l6r Target Id
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    Related PDB Ids 1kyt 
    Molecular Characteristics
    Source
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    Alias Ids
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    TPS4415,CAC11321, 2303
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 2
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.43 Rfactor 0.171
    Waters
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    Solvent Content 49.42

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    Ligand Information
    Ligands FMT (FORMIC) x 1
    Metals CA (CALCIUM) x 5

    Jmol

     
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    Google Scholar output for 1l6r
    1. Caught in the act: The structure of phosphorylated _-phosphoglucomutase from Lactococcus lactis
    SD Lahiri, G Zhang, D Dunaway-Mariano, KN Allen - Biochemistry, 2002 - ACS Publications
     
    2. Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied
    AM Burroughs, KN Allen, D Dunaway-Mariano - Journal of molecular , 2006 - Elsevier
     
    3. HAD superfamily phosphotransferase substrate diversification: structure and function analysis of HAD subclass IIB sugar phosphatase BT4131
    Z Lu, D Dunaway-Mariano, KN Allen - Biochemistry, 2005 - ACS Publications
     
    4. Analysis of the substrate specificity loop of the HAD superfamily cap domain
    SD Lahiri, G Zhang, J Dai, D Dunaway-Mariano - Biochemistry, 2004 - ACS Publications
     
    5. X-ray crystal structure of the hypothetical phosphotyrosine phosphatase MDP-1 of the haloacid dehalogenase superfamily
    E Peisach, JD Selengut, D Dunaway-Mariano - Biochemistry, 2004 - ACS Publications
     
    6. An iterative knowledge_based scoring function for proteinprotein recognition
    SY Huang, X Zou - Proteins: Structure, Function, and , 2008 - Wiley Online Library
     
    7. Structure and activity analyses of Escherichia coli K-12 NagD provide insight into the evolution of biochemical function in the haloalkanoic acid dehalogenase
    LW Tremblay, D Dunaway-Mariano, KN Allen - Biochemistry, 2006 - ACS Publications
     
    8. De-orphaning the structural proteome through reciprocal comparison of evolutionarily important structural features
    RM Ward, S Erdin, TA Tran, DM Kristensen - PloS one, 2008 - dx.plos.org
     
    9. Investigation of metal ion binding in phosphonoacetaldehyde hydrolase identifies sequence markers for metal-activated enzymes of the HAD enzyme superfamily
    G Zhang, MC Morais, J Dai, W Zhang - Biochemistry, 2004 - ACS Publications
     
    10. Kinetic evidence for a substrate-induced fit in phosphonoacetaldehyde hydrolase catalysis
    G Zhang, AS Mazurkie, D Dunaway-Mariano - Biochemistry, 2002 - ACS Publications
     
    11. Crystal structure of trehalose_6_phosphate phosphataserelated protein: Biochemical and biological implications
    KN Rao, D Kumaran, J Seetharaman - Protein , 2006 - Wiley Online Library
     
    12. The thrH gene product of Pseudomonas aeruginosa is a dual activity enzyme with a novel phosphoserine: homoserine phosphotransferase activity
    SK Singh, K Yang, S Karthikeyan, T Huynh - Journal of Biological , 2004 - ASBMB
     
    13. Patch prediction of protein interaction sites: validation of a scoring function for an online server
    S Jones, Y Mukarami - Bioinformatics Research and Development, 2007 - Springer
     
    14. Using correlated parameters for improved ranking of proteinprotein docking decoys
    P Mitra, D Pal - Journal of computational chemistry, 2011 - Wiley Online Library
     
    15. A Method to Find Sequentially Separated Motifs in Biological Sequences (SSMBS)
    C Kumar, N Kumar, S Rangarajan - Pattern Recognition in , 2008 - Springer
     
    16. Computational and experimental investigations of forces in protein folding
    DA Schell - 2003 - txspace.di.tamu.edu
     
    17. Structure of a haloacid dehalogenase superfamily phosphatase PH1421 from Pyrococcus horikoshii OT3: oligomeric state and thermoadaptation mechanism
    H Yamamoto, K Takio, M Sugahara - Section D: Biological , 2008 - scripts.iucr.org
     
    18. Overexpression, purification, characterization and preliminary crystallographic study of phosphoglycolate phosphatase from Shigella flexneri 2a strain 301
    H Liu, H Zhou, D Zhu, R Bi - Acta Crystallographica Section F: , 2008 - scripts.iucr.org
     
    19. Dynamic features of homo_dimer interfaces calculated by normal mode analysis
    Y Tsuchiya, K Kinoshita, S Endo, H Wako - Protein Science, 2012 - Wiley Online Library
     
    20. Estudos estruturais da enzima fosforribosilpirofosfato sintase de cana-de-acar
    HB Napolitano - 2004 - ifsc.usp.br
     

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    Protein Summary


    Ligand Summary

    Reviews

    References

     

    No references found.

    Tag page

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