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The Open Protein Structure Annotation Network
PDB Keyword
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3d7q

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of XisI protein-like (ZP_00106052.1) from Nostoc punctiforme PCC 73102 at 2.30 A resolution. To be published
    Site JCSG
    PDB Id 3d7q Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1536,NPUN_22DEC03_PLASMIDA_REVISED_GENEPNPAR114, BIG_57, BIG_402, 86215
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.20 Rfactor 0.206
    Waters
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    Solvent Content 43.97

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 3d7q
    1. Distributed structure determination at the JCSG
    H van den Bedem, G Wolf, Q Xu - Section D: Biological , 2011 - scripts.iucr.org
     

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    Protein Summary

    Gene Npun_AR114 from Nostoc punctiforme pcc 73102 encodes the YP_0018700030 amino acid sequence, an fdxN element excision controlling factor protein that belongs to the XisI group (PF08869). Its genome neighborhood includes the presence of another fdxN element, the XisH protein (score 0.87).

    SCOP classifies 3d7q in the alpha+beta class, XisI-like (super)family. There are only three structurally similar proteins (Dali Z-scr=18) found in PDB (

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    (Z=17),
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    and
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    (both Z=15)).
    They are the first group of crystal structures from the XisI-like protein family.

    3d7q functions as a dimer, with one monomer (green) and its symmetry partner (pink) depicted below. 

    Ligand Summary



    References

    Reviews

    References

     

    No references found.

    Files (1)

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     assemblyA.png
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    202.46 kB22:03, 30 Jun 2008dweekesActions
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