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3d7i

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of carboxymuconolactone decarboxylase family protein possibly involved in oxygen detoxification (1591455) from METHANOCOCCUS JANNASCHII at 1.75 A resolution. To be published
    Site JCSG
    PDB Id 3d7i Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1762,1591455
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 3
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.67 Rfactor 0.170
    Waters
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    Solvent Content 53.92

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 3d7i
    1. Target domain definition and classification in CASP8
    ML Tress, I Ezkurdia - : Structure, Function, and , 2009 - Wiley Online Library
     
    2. Reliable protein structure refinement using a physical energy function
    MS Lin, T Head_Gordon - Journal of computational chemistry, 2011 - Wiley Online Library
     
    3. Crystallization and preliminary X-ray crystallographic analysis of-carboxymucolactone decarboxylase from Sulfolobus solfataricus
    HY Lee, JK Yang - Section F: Structural Biology and Crystallization , 2009 - scripts.iucr.org
     
    4. A New Library of Surface Patches: Design and Applications
    R Gamliel, K Kedem, R Kolodny, C Keasar - 2009 - cs.bgu.ac.il
     

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    Protein Summary

    JCSG Structure Refinement Summary

    381877 is a hypothetical protein that belongs to the carboxymuconolactone decarboxylase family, PFAM PF02627. The monomeric structure is all-helical, with a four-helix bundle connected to two additional helices through a linker region (Fig 1). The biologically relevant form is likely a hexamer, which is formed via significant interactions between the chains (Fig 2).


    Ligand Summary



    References

    Reviews

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