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3bwx

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of an alpha/beta hydrolase (YP_496220.1) from Novosphingobium aromaticivorans DSM 12444 at 1.50 A resolution. To be published
    Site JCSG
    PDB Id 3bwx Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1776,YP_496220.1, 291243
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.00 Rfactor 0.161
    Waters
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    Solvent Content 38.41

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 3bwx
    1. Structure determination and characterization of the vitamin B6 degradative enzyme (E)-2-(acetamidomethylene) succinate hydrolase
    KM McCulloch, T Mukherjee, TP Begley, SE Ealick - Biochemistry, 2010 - ACS Publications
     
    2. Crystal Structure of a Novel Esterase Rv0045c from Mycobacterium tuberculosis
    X Zheng, J Guo, L Xu, H Li, D Zhang, K Zhang, F Sun - PloS one, 2011 - dx.plos.org
     
    3. The unusual extended C-terminal helix of the peroxisomal [alpha]/[beta]-hydrolase Lpx1 is involved in dimer contacts but dispensable for dimerization
    S Thoms, J Hofhuis, C Thing, J Grtner - Journal of structural , 2011 - Elsevier
     

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    Protein Summary

    This protein is an alpha/beta hydrolase.  It shares both sequence and structural similarity to other alpha/beta hydrolases according to BLAST (best hit to gi|87198963|ref|YP_496220.1| , E-value: 9e-147), FFAS (best hit to a haloalkane dehalogenase from a Rhodococcus species with score: -76.000, PDB code: 1bn6 ), and DALI (hits to 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (bphd) from Rhodococcus sp. strain rha1, Z-score: 23.9, RMSD: 3.1, PDB code: 1c4x and a haloalkane dehalogenase at ph 5.0 containing chloride, Z-score: 22.6, RMSD: 2.8, PDB code:1b6g).  1b6g has a catalytic triad composed of Asp124, His289, and Asp260.  The catalytic triad is conserved in this protein and is composed of: Ser105, His 265, and Asp239.

    Ligand Summary



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