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2o4t

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of BH3976 (10176601) from Bacillus halodurans at 1.95 A resolution. To be published
    Site JCSG
    PDB Id 2o4t Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1601,10176601, PF06304
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 3.33 Rfactor 0.203
    Waters
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    Solvent Content 63.02

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 2o4t
    1. On the combination of molecular replacement and single-wavelength anomalous diffraction phasing for automated structure determination
    S Panjikar, V Parthasarathy, VS Lamzin - Section D: Biological , 2009 - scripts.iucr.org
     

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    Protein Summary

    Gene BH3976 from Bacillus halodurans encodes the NP_244844 protein that belongs to the DUF1048 group (PF06304) inside the Yip1 clan; similar structures are annotated as membrane proteins. It has predicted (string.embl.de) functional associations with genomic neighbors: BH3977 protein, BH3978 (ABC transporter), and BH3979 (ABC transporter).

    SCOP classifies 2o4t in the all alpha class, left-handed superhelix fold, BH3980-like (super)family. DALI top hits are with the hypothetical protein 2o3l (Zscr=11) and the BH3980 protein 2hh6 (Z=11). Weaker hits are with the carboxyl-terminal domain (CTD) binding of the SET2 SRI domain that couples histone H3 Lys36 methylation to transcription (PDB: 2c5z; Z-score 5.2; RMSD 3.9), and a protein of unknown function (PDB: 2ffj, Z-score 5.0; RMSD 2.6).

    Ligand Summary



    References

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