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The Open Protein Structure Annotation Network
PDB Keyword
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2nlv

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of XisI protein-like (YP_324325.1) from Anabaena Variabilis ATCC 29413 at 1.30 A resolution. To be published
    Site JCSG
    PDB Id 2nlv Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1523,YP_324325.1, BIG_402, BIG_57, 86302
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 2
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.06 Rfactor 0.175
    Waters
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    Solvent Content 40.21

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 2nlv
    1. Modeling discrete heterogeneity in X-ray diffraction data by fitting multi-conformers
    H Van Den Bedem, A Dhanik, JC Latombe - Section D: Biological , 2009 - scripts.iucr.org
     
    2. Modeling structural heterogeneity in proteins from X-ray data
    A Dhanik, H Van Den Bedem, A Deacon - Algorithmic Foundation of , 2009 - Springer
     

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    Protein Summary

    The AVA3825 gene from A. variabilis ATCC 29413 encodes the YP_324325 amino acid sequence belonging to the XisI-like proteins (fdxN element excision controlling factor protein) (PF08869). It has weak structural similarity to aldehyde oxidoreductase (PDB structure 1dgj; DALI Z-score = 5.4; RMSD = 2.3; 3% sequence identity for 59 superimposed residues). The most conserved residues are Trp48 and Trp69  (both are located next to two different  clefts).

    Ligand Summary



    References

    Reviews

    References

     

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