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The Open Protein Structure Annotation Network
PDB Keyword
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2g40

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of hypothetical protein (6459694) from Deinococcus radiodurans at 1.70 A resolution. To be published
    Site JCSG
    PDB Id 2g40 Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1376,6459694, BIG_379, PF02589, 289799
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 1.80 Rfactor 0.178
    Waters
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    Solvent Content 29.30

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 2g40

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    Protein Summary

    Gene DR_1909 from Deinococcus radiodurans encodes the NP_295632 protein that belongs to the DUF162 family (PF02589).

    2g40 shows a reasonably good structural alignment (3.2 Å over 87 residues, Z-score 3.4, 11% sequence id) with a transhydrogenase from Rhodospirillum rubrum (PDB id: 1u28). 2g40 shares some common features with the dIII and each of the two domains of the dI subunits of 1u28, such as a core parallel beta sheet flanked by alpha-helices on both sides, but a very different strand order and only partial topological similarity. 2g40 appears to be dimeric.

        

    To do: check whether NAD(P) can be docked onto 2g40. No visible GxGxxG motif.

    Ligand Summary



    References

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