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2a9v

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of (np_394403.1) from THERMOPLASMA ACIDOPHILUM at 2.45 A resolution. To be published
    Site JCSG
    PDB Id 2a9v Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1358,NP_394403.1
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 4
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.00 Rfactor 0.176
    Waters
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    Solvent Content 37.99

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 2a9v
    1. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches
    R Schwarzenbacher, A Godzik - Section D: Biological , 2007 - scripts.iucr.org
     
    2. Crystal structure of homoserine O_succinyltransferase from Bacillus cereus at 2.4 resolution
    C Zubieta, S Krishna, D McMullan - Proteins: Structure, , 2007 - Wiley Online Library
     
    3. Crystal structure of the ATPPase subunit and its substrate-dependent association with the GATase subunit: a novel regulatory mechanism for a two-subunit-type GMP
    S Maruoka, S Horita, WC Lee, K Nagata - Journal of molecular , 2010 - Elsevier
     
    4. Protein structural classification and family identification by multifractal analysis and wavelet spectrum
    SM Zhu, ZG Yu, A Vo - Chinese Physics B, 2011 - iopscience.iop.org
     

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    Protein Summary

    The gene Ta0944m from Thermoplasma acidophilum encodes for the protein NP_394403.1, a Type 1 glutamine amidotransferase (GATase1)  domain found in GMP synthetase PF00117.  The domain reveals flavodoxin-like fold type SCOP52171.  GMP synthetase is a glutamine amidotransferase from the de novo purine biosynthetic pathway. Glutamine amidotransferase (GATase) activity catalyse the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. GMP synthetase catalyzes the amination of the nucleotide precursor xanthosine 5'-monophospahte to form GMP.  The crystal structures of homologous domains from other organisms are available: 2D7JPyrococcus horikoshii; 1W18, GLUCONACETOBACTER DIAZOTROPHICUS.

    Ligand Summary



    References

    Reviews

    References

     

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