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1z9f

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of a single-stranded DNA-binding protein (TM0604) from Thermotoga maritima at 2.60 A resolution. Proteins 63 256-260 2006
    Site JCSG
    PDB Id 1z9f Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1220,TM0604, 89398
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 3.28 Rfactor 0.223
    Waters
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    Solvent Content 62.23

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 1z9f
    1. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches
    R Schwarzenbacher, A Godzik - Section D: Biological , 2007 - scripts.iucr.org
     
    2. Single-stranded DNA-binding protein complex from Helicobacter pylori suggests an ssDNA-binding surface
    KW Chan, YJ Lee, CH Wang, H Huang - Journal of molecular , 2009 - Elsevier
     
    3. Crystal structure of a single_stranded DNA_binding protein (TM0604) from Thermotoga maritima at 2.60 resolution
    M DiDonato, S Sri Krishna - Proteins: Structure, , 2006 - Wiley Online Library
     
    4. Autoindexing with outlier rejection and identification of superimposed lattices
    NK Sauter, BK Poon - Journal of Applied Crystallography, 2010 - scripts.iucr.org
     
    5. X-ray and molecular-dynamics studies on Mycobacterium leprae single-stranded DNA-binding protein and comparison with other eubacterial SSB structures
    PS Kaushal, P Singh, A Sharma - Section D: Biological , 2010 - scripts.iucr.org
     
    6. Structure of the single-stranded DNA-binding protein from Streptomyces coelicolor
    Z Stefanic, D Vujaklija, M Luic - Acta Crystallographica Section D: , 2009 - scripts.iucr.org
     
    7. Single-Stranded DNA-Binding Protein Complex
    YJ Sun - J. Mol. Biol, 2009 - 144.206.159.178
     

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    Protein Summary

    Single-strand binding protein - TM0604 (SSB, Helix-destabilizing protein) from Thermotoga maritima (PubMed:16435371) plays essential roles in DNA replication, recombination, and repair.

    The functions of SSB protein from Thermotoga maritima may be interdependent with its genomic neighbours (RS18_THEMA "30S ribosomal protein S18" and RS6_THEMA "30S ribosomal protein S6") and proteins with the similar phylogenetic cooccurrence (RL20_THEMA "50S ribosomal protein L20", RL27_THEMA "50S ribosomal protein L27", NUSG_THEMA "Transcription antitermination protein nusG", Q9X1A0 "Hypothetical protein TM1380").

    TM0604 has OB-fold (SCOP sunid:50198).

    Similar structures: 1s3oA, 1x3eA, 1ue1A, 2cwaA, 1se8A, 1v1qA, 2fxqA,  and 1quqA.


    Ligand Summary



    References

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