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1vm8

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution. To be published
    Site JCSG
    PDB Id 1vm8 Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1338,16741099, 281893, 289429, 289401, 289376, 282753
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 2
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.90 Rfactor 0.20676
    Waters
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    Solvent Content 57.25

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 1vm8
    1. Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard
    TC Terwilliger, PD Adams, RJ Read - Section D: Biological , 2009 - scripts.iucr.org
     
    2. FLORA: a novel method to predict protein function from structure in diverse superfamilies
    OC Redfern, BH Dessailly, TJ Dallman - PLoS computational , 2009 - dx.plos.org
     
    3. Crystal structure of uridine-diphospho-N-acetylglucosamine pyrophosphorylase from Candida albicans and catalytic reaction mechanism
    D Maruyama, Y Nishitani, T Nonaka, A Kita - Journal of Biological , 2007 - ASBMB
     
    4. Homology modelling of pyrophosphosrylase, enzyme involved in chitin pathway of Moniliophthora perniciosa
    MC Dos Santos Jr, AG Taranto, SA De Assis - International Journal of , 2009 - Inderscience
     
    5. Purification, characterization and structural determination of UDP-N-acetylglucosamine pyrophosphorylase produced by Moniliophthora perniciosa
    MC Santos Junior, PA Gonalves - Journal of the Brazilian , 2011 - SciELO Brasil
     
    6. Applications of Structural Bioinformatics for the Structural Genomics Era
    M Novotny - 2007 - uu.diva-portal.org
     

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    Protein Summary

    The gene 16741099 from  Mus musculus encodes an enzyme UDP-N-acetylglucosamine diphosphorylase (alternative names: N-acetylglucosamine-1-phosphate uridyltransferase, UDP-N-acetylglucosamine pyrophosphorylase) EC:2.7.7.23.  The enzyme catalyzes the nucleotidyl group transfer reaction: UTP + N-acetyl-alpha-D-glucosamine-1-phosphate = diphosphate + UDP-N-acetyl-D-glucosamine.  This enzyme belongs to the family of transferases, specifically those transferring phosphorus-containing nucleotide groups (nucleotidyltransferases) PF01704.  This enzyme is a part of UDP-N-acetylglucosamine biosynthesis pathway.  The protein belongs to the class of alpha and beta proteins (a+b) and reveals nucleotide-diphospho-sugar transferases fold type SCOP53447.  To date multiple structures of the enzyme homologues from different organisms have been determined: 1JV1, human; 2YQCCandida albicans.

    Ligand Summary



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