.
The Open Protein Structure Annotation Network
PDB Keyword
.

1vlw

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (TM0066) from Thermotoga maritima at 2.30 A resolution. To be published
    Site JCSG
    PDB Id 1vlw Target Id 281947
    Molecular Characteristics
    Source Thermotoga maritima msb8
    Alias Ids TPS1180,TM0066, 83928 Molecular Weight 22235.01 Da.
    Residues 205 Isoelectric Point 6.92
    Sequence mkmeelfkkhkivavlransveeakekalavfeggvhlieitftvpdadtvikelsflkekgaiigagt vtsveqcrkavesgaefivsphldeeisqfckekgvfympgvmtptelvkamklghtilklfpgevvgp qfvkamkgpfpnvkfvptggvnldnvcewfkagvlavgvgsalvkgtpdevrekakafvekirgcte
      BLAST   FFAS

    Structure Determination
    Method XRAY Chains 3
    Resolution (Å) 2.30 Rfree 0.22106
    Matthews' coefficent 2.16 Rfactor 0.17663
    Waters 120 Solvent Content 42.71

    Access denied for user 'root'@'localhost' (using password: YES) (click for details)

    Ligand Information
    Ligands
    Metals

    Jmol

     
    Google Scholar output for 1vlw
    1. Protein structure database search and evolutionary classification
    JM Yang, CH Tung - Nucleic acids research, 2006 - Oxford Univ Press
     
    2. Automated search-model discovery and preparation for structure solution by molecular replacement
    RM Keegan, MD Winn - Acta Crystallographica Section D: Biological , 2007 - iucr.org
     
    3. His-tag impact on structure
    M Carson, DH Johnson, H McDonald - Section D: Biological , 2007 - scripts.iucr.org
     
    4. Domain definition and target classification for CASP6
    M Tress, CH Tai, G Wang, I Ezkurdia - PROTEINS: , 2005 - Wiley Online Library
     
    5. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches
    R Schwarzenbacher, A Godzik - Section D: Biological , 2007 - scripts.iucr.org
     
    6. I. Association behavior of ACHC-rich beta-peptide foldamers. II. Fluorine-19 NMR methods for monitoring alpha-peptide folding
    WC Pomerantz - 2008 - books.google.com
     

    Protein Summary


    TM0066 encodes a lysine-dependent (class-I aldolase) with a TIM-barrel fold. A detailed analysis of the structure and catalytic mechanism can be found at Fullerton 2006.

    Ligand Summary



    References

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch